chem-bla-ics
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  • Oct 1, 2009

    Google Wave Invite: but you need to work on the CDK and the CDKitty robot

    I just posted to below email to the cdk-user mailing list. Next Monday, I’ll decide.

    less than 1 minute read
  • Oct 1, 2009

    Processing the ChEBI MDL SD file with the CDK

    Bioclipse has a bug report about browsing the ChEBI SD file in its moltable editor. Some entries make Bioclipse crash (as reported), or just very sluggish as with my Dell superlapcomputer :)

    6 minute read
  • Sep 23, 2009

    Extension point for running JUnit tests in a RCP Application instance?

    One thing that has been on my wishlist is to be able to run the unit tests we have for Bioclipse from inside a running Bioclipse instance. That is, we have a Bioclipse Test Suite features on the update site, matching the functional features we have there. Each such test suite would run all JUnit tests we have for that feature.

    1 minute read
  • Sep 18, 2009

    JChemPaint update: merging of patches and CDK statistics

    With the JChemPaint workshop just passed, there is much work from UU and the EBI to be integrated. Moreover, Rajarshi just merged a lot of fixes from CDK 1.2.x into the master branch, which will be a big rebase too. That said, I need to do this to recalculate source code statistics for the CDK.

    less than 1 minute read
  • Sep 18, 2009

    My HTML+RDFa homepage

    Finally got around to adding a few more bits to my new science homepage: egonw.github.com. Cool thing about this new page is that it is HTML+RDFa, so, my new FOAF profile is embedded in the HTML:

    less than 1 minute read
  • Sep 17, 2009

    Really free chemistry books

    With pleasure I read Analogue or Digital? - Both, Please. Funnily, I just created MP3 (or, preferably Ogg Vorbis, superior but hardly any support by commercial companies, who rather seem to pay license fees) directly from the CD.

    1 minute read
  • Sep 13, 2009

    VRMS meme: how much non-free software are you running?

    Over at Planet Ubuntu there is a meme running around VRMS (Virtual Richard M. Stallman, brilliant name!) which finds non-free software on your desktop. I uninstalled Sun’s Java6, for which there is the OpenJDK6 alternative.

    less than 1 minute read
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  • Egon Willighagen
  • 0000-0001-7542-0286

Chemblaics (pronounced chem-bla-ics) is the science that uses open science and computers to solve problems in chemistry, biochemistry and related fields.