lipidmaps-wp-curation

WikiPathways WP5192

Tests

Summary

Fails

DataNodesTests.dataNodesWithoutIdentifier

The following DataNodes have no identifier: 2

http://classic.wikipathways.org/instance/WP5192_r122557 http://rdf.wikipathways.org/Pathway/WP5192_r122557/DataNode/d0bf2 (Protein associated 
with Myc)
http://classic.wikipathways.org/instance/WP5192_r122557 http://rdf.wikipathways.org/Pathway/WP5192_r122557/DataNode/c1f4b (Ras homolog enriched in the brain)

InteractionTests.interactionsWithLabels

Interactions found that involve Labels: 8

http://classic.wikipathways.org/instance/WP5192_r122557 "Stimulation or inhibition depending on the animal model used " with graphId febd3
http://classic.wikipathways.org/instance/WP5192_r122557 "Stimulation or inhibition depending on the animal model used " with graphId ab173
http://classic.wikipathways.org/instance/WP5192_r122557 "Aging" with graphId e60cb
http://classic.wikipathways.org/instance/WP5192_r122557 "Neuro degeneration" with graphId b1af8
http://classic.wikipathways.org/instance/WP5192_r122557 "Neuro degeneration" with graphId dfc5d
http://classic.wikipathways.org/instance/WP5192_r122557 "Stress response" with graphId dd844
http://classic.wikipathways.org/instance/WP5192_r122557 "Aging" with graphId e215e
http://classic.wikipathways.org/instance/WP5192_r122557 "Stimulation or inhibition depending on the animal model used " with graphId a7d9c

LIPIDMAPSTests.onlyLIPIDMAPS

Expected a LIPID MAPS identifier, but found other identifiers: 6

http://classic.wikipathways.org/instance/WP5192_r122557 RNS has 62764 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP5192_r122557 ceramide 1-phosphates has CHEBI:16197 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP5192_r122557 Sphingosine has CHEBI:45719 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP5192_r122557 ceramide has CHEBI:52639 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP5192_r122557 Inhibitor of NF-kB kinase has CHEBI:77113 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP5192_r122557 Sphingosine 1-phosphate has HMDB0000277 from HMDB but expected a LIPID MAPS identifier

More details at https://wikipathways.github.io/WikiPathwaysCurator/LIPIDMAPSTests/onlyLIPIDMAPS

WikidataTests.chebiWithoutMapping

ChEBI identifiers without Wikidata mappings: 1

https://identifiers.org/chebi/CHEBI:77113 (Inhibitor of NF-kB kinase) does not have a Wikidata mapping in http://classic.wikipathways.org/instance/WP5192_r122557 ;