SARS-CoV-2-Queries

virusGenesSARSr.rq

Ejemplos de código: curl

SPARQL

SELECT ?virus ?virusLabel ?gene ?geneLabel ?ncbigene WHERE {
  VALUES ?virus {
    wd:Q16000326 # SL-CoV-WIV1
    wd:Q88162038 # Bat SARS coronavirus Rp1
    wd:Q85939995 # SHC014-CoV
    wd:Q82069695 # SARS-CoV-2
    wd:Q34967815 # SARS coronavirus
    wd:Q85438966 # severe acute respiratory syndrome coronavirus
    wd:Q278567   # SARSr-CoV / SARS-CoV
  }
  ?gene wdt:P703 ?virus ; wdt:P31 wd:Q7187 .
  OPTIONAL { ?gene wdt:P351 ?ncbigene }
  SERVICE wikibase:label { bd:serviceParam wikibase:language "es,en". }
}

ejecutar o editar

Resultados

virus	gene	ncbigene
SARS-CoV (edit)	hypothetical protein sars7a (edit)	1489674
SARS-CoV-2 (edit)	ORF3d (edit)
SARS-CoV-2 (edit)	surface glycoprotein (edit)	43740568
SARS-CoV-2 (edit)	ORF1a polyprotein;ORF1ab polyprotein (edit)	43740578
SARS-CoV-2 (edit)	ORF3a protein-encoding gene (edit)	43740569
SARS-CoV-2 (edit)	envelope protein (edit)	43740570
SARS-CoV-2 (edit)	membrane glycoprotein (edit)	43740571
SARS-CoV-2 (edit)	ORF6 protein (edit)	43740572
SARS-CoV-2 (edit)	ORF7a protein (edit)	43740573
SARS-CoV-2 (edit)	ORF7b (edit)	43740574
SARS-CoV-2 (edit)	ORF8 protein (edit)	43740577
SARS-CoV-2 (edit)	nucleocapsid phosphoprotein (edit)	43740575
SARS-CoV-2 (edit)	ORF10 protein (edit)	43740576
SARS-CoV-2 (edit)	Record to support submission of GeneRIFs for a gene not in Gene (COVID-19 virus; HCoV-19; Human coronavirus 2019; SARS-2; SARS-CoV2; SARS2). (edit)	43562271
SARS coronavirus (edit)	protein E (edit)	1489671
SARS coronavirus (edit)	hypothetical protein sars6 (edit)	1489673
SARS coronavirus (edit)	hypothetical protein sars9b (edit)	1489679
SARS coronavirus (edit)	Record to support submission of GeneRIFs for a gene not in Gene (Human coronavirus (strain SARS); SARS-like coronavirus; SARS-related coronavirus). (edit)	8673700
SARS coronavirus (edit)	hypothetical protein sars7a (edit)	1489674
SARS coronavirus (edit)	hypothetical protein sars7b (edit)	1489675
SARS coronavirus (edit)	hypothetical protein sars3a (edit)	1489669
SARS coronavirus (edit)	matrix protein (edit)	1489672
SARS coronavirus (edit)	orf1a polyprotein (pp1a);orf1ab polyprotein (pp1ab) (edit)	1489680
SARS coronavirus (edit)	hypothetical protein sars3b (edit)	1489670
SARS coronavirus (edit)	hypothetical protein sars8a (edit)	1489676
SARS coronavirus (edit)	E2 glycoprotein precursor (edit)	1489668
SARS coronavirus (edit)	hypothetical protein sars8b (edit)	1489677
SARS coronavirus (edit)	nucleocapsid protein (edit)	1489678

Ejemplos de código

curl

curl -s https://raw.githubusercontent.com/egonw/SARS-CoV-2-Queries/master/sparql/virusGenesSARSr.rq | sed 's+<lang/>+es+' > virusGenesSARSr.rq

curl -H "Accept: text/tab-separated-values" -G https://query.wikidata.org/bigdata/namespace/wdq/sparql --data-urlencode query@virusGenesSARSr.rq

Esta consulta SPARQL está disponible en CCZero.

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