lipidmaps-wp-curation

WikiPathways WP5275

• WikiPathways: WP5275
• Scholia: WP5275
• WPRDF file: wp/Human/WP5275.ttl
• GPMLRDF file: wp/gpml/Human/WP5275.ttl
• SBML file: sbml/WP5275.sbml (SVG) (conversion notes)

Tests

• CASMetabolitesTests: all 2 tests OK!
• ChEBIMetabolitesTests: all 4 tests OK!
• ChemSpiderTests: all 2 tests OK!
• DataNodesTests: all 5 tests OK!
• EnsemblTests: all 4 tests OK!
• GeneTests: all 4 tests OK!
• GeneralTests: all 13 tests OK!
• HMDBMetabolitesTests: all 1 tests OK!
• HMDBSecMetabolitesTests: all 3 tests OK!
• InteractionTests
  • noMetaboliteToNonMetaboliteConversions: .. all OK!
  • noNonMetaboliteToMetaboliteConversions: .. all OK!
  • noGeneProteinConversions: .. all OK!
  • nonNumericIDs: .. all OK!
  • interactionsWithLabels: .x we found 1 problem(s):
    • Interactions found that involve Labels: 7
  • possibleTranslocations: .. all OK!
  • noProteinProteinConversions: .. all OK!
  • incorrectKEGGIdentifiers: .. all OK!
• KEGGMetaboliteTests: all 2 tests OK!
• LIPIDMAPSTests: all 2 tests OK!
• MetaboliteStructureTests: all 1 tests OK!
• MetabolitesTests: all 14 tests OK!
• OudatedDataSourcesTests: all 7 tests OK!
• PathwayTests: all 7 tests OK!
• ProteinsTests: all 2 tests OK!
• PubChemMetabolitesTests: all 3 tests OK!
• ReferencesTests: all 6 tests OK!
• UniProtTests: all 5 tests OK!
• WikidataTests: all 14 tests OK!

Summary

• Number of test classes: 21
• Number of tests: 109
• Number of assertions: 220
• Number of fails: 1

Fails

InteractionTests.interactionsWithLabels

Interactions found that involve Labels: 7

http://classic.wikipathways.org/instance/WP5275_r125918 "Neonatal 
adrenoleukodystrophy" with graphId b81a0
http://classic.wikipathways.org/instance/WP5275_r125918 "RCDP3" with graphId da0aa
http://classic.wikipathways.org/instance/WP5275_r125918 "Zellweger
syndrome" with graphId c65d7
http://classic.wikipathways.org/instance/WP5275_r125918 "RCDP4" with graphId b22a6
http://classic.wikipathways.org/instance/WP5275_r125918 "RCDP5" with graphId daffe
http://classic.wikipathways.org/instance/WP5275_r125918 "RCDP2" with graphId b12d0
http://classic.wikipathways.org/instance/WP5275_r125918 "RCDP1" with graphId ccfff