Today Ola, Jonathan and I have a mini-hack session on getting JChemPaint support ported from Bioclipse1 to Bioclipse2. And, we made some progress:

I’m sure there is still a lot to do, but this is promising… :)

Oh, and BTW, this is based on the JChemPaint 2.3 / CDK 1.0.2 branch, in case you are interested in those details.

bioclipse  jchempaint